STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_151750Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
SOVF_144790
DAGKc domain-containing protein.
    
 0.939
SOVF_190220
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
   
 
 0.931
SOVF_185890
Uncharacterized protein.
     
 0.931
SOVF_107720
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
     
 0.926
SOVF_053370
Neutral ceramidase.
    
 0.922
SOVF_047340
Uncharacterized protein.
  
  
 
0.901
SOVF_130600
Aminotran_1_2 domain-containing protein.
   
  
 0.450
SOVF_110050
Aminotran_1_2 domain-containing protein.
   
  
 0.447
SOVF_057740
DAGKc domain-containing protein.
    
 0.418
SOVF_031680
DAGKc domain-containing protein.
    
 0.418
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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