STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_153710STAS domain-containing protein. (647 aa)    
Predicted Functional Partners:
SOVF_146400
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.584
SOVF_042530
Uncharacterized protein.
   
 
 0.528
SOVF_119330
Uncharacterized protein.
    
   0.461
SOVF_102250
Uncharacterized protein.
    
 
 0.452
SOVF_142180
Uncharacterized protein.
    
   0.450
SOVF_023270
Uncharacterized protein.
    
 
 0.449
psaI
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit; Belongs to the PsaI family.
    
   0.439
SOVF_003050
Uncharacterized protein.
    
 
 0.425
SOVF_034940
Uncharacterized protein.
    
   0.414
psbH
Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbH family.
    
   0.414
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.