SOVF_149760 protein (Spinacia oleracea) - STRING interaction network

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Score

SOVF_149760

WD_REPEATS_REGION domain-containing protein. (562 aa)

Predicted Functional Partners:

SOVF_134540

0.968

SOVF_075970

0.963

SOVF_008620

0.957

SOVF_004180

0.952

SOVF_073520

0.941

SOVF_209200

0.936

SOVF_077950

0.936

SOVF_140750

0.919

SOVF_063160

0.919

SOVF_197040

0.886

Your Current Organism:

Spinacia oleracea

NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SOVF_004180	SOVF_008620	A0A0K9R4D7	A0A0K9S0E7	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
SOVF_004180	SOVF_063160	A0A0K9R4D7	A0A0K9RK17	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
SOVF_004180	SOVF_073520	A0A0K9R4D7	A0A0K9RF91	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
SOVF_004180	SOVF_075970	A0A0K9R4D7	A0A0K9REH8	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
SOVF_004180	SOVF_077950	A0A0K9R4D7	A0A0K9RFB4	Sm domain-containing protein.	Tr-type G domain-containing protein.	0.971
SOVF_004180	SOVF_134540	A0A0K9R4D7	A0A0K9QW54	Sm domain-containing protein.	Uncharacterized protein.	0.978
SOVF_004180	SOVF_140750	A0A0K9R4D7	A0A0K9QU94	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
SOVF_004180	SOVF_149760	A0A0K9R4D7	A0A0K9QTJ2	Sm domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.952
SOVF_004180	SOVF_197040	A0A0K9R4D7	A0A0K9QBU1	Sm domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.919
SOVF_004180	SOVF_209200	A0A0K9R4D7	A0A0K9Q9S2	Sm domain-containing protein.	EFG_C domain-containing protein.	0.971
SOVF_008620	SOVF_004180	A0A0K9S0E7	A0A0K9R4D7	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
SOVF_008620	SOVF_063160	A0A0K9S0E7	A0A0K9RK17	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
SOVF_008620	SOVF_073520	A0A0K9S0E7	A0A0K9RF91	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
SOVF_008620	SOVF_075970	A0A0K9S0E7	A0A0K9REH8	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
SOVF_008620	SOVF_077950	A0A0K9S0E7	A0A0K9RFB4	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Tr-type G domain-containing protein.	0.985
SOVF_008620	SOVF_134540	A0A0K9S0E7	A0A0K9QW54	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.989
SOVF_008620	SOVF_140750	A0A0K9S0E7	A0A0K9QU94	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
SOVF_008620	SOVF_149760	A0A0K9S0E7	A0A0K9QTJ2	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	WD_REPEATS_REGION domain-containing protein.	0.957
SOVF_008620	SOVF_197040	A0A0K9S0E7	A0A0K9QBU1	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.918
SOVF_008620	SOVF_209200	A0A0K9S0E7	A0A0K9Q9S2	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	EFG_C domain-containing protein.	0.970