STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_135480DUF4110 domain-containing protein. (682 aa)    
Predicted Functional Partners:
SOVF_146620
Uncharacterized protein.
   
    0.608
SOVF_076500
Uncharacterized protein.
   
    0.477
SOVF_194120
Uncharacterized protein.
      
 0.476
SOVF_108300
Brix domain-containing protein.
   
    0.463
SOVF_149750
Bms1-type G domain-containing protein.
   
    0.443
SOVF_026160
Uncharacterized protein.
   
    0.440
SOVF_106790
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.438
SOVF_201750
Uncharacterized protein.
   
    0.437
SOVF_178230
NUC153 domain-containing protein.
   
    0.437
SOVF_172880
CBF domain-containing protein.
   
    0.437
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.