STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_135560Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (558 aa)    
Predicted Functional Partners:
SOVF_162650
Uncharacterized protein.
   
0.786
SOVF_198800
Uncharacterized protein.
  
  
 0.774
SOVF_179880
Uncharacterized protein; Belongs to the GroES chaperonin family.
 
 
 0.735
SOVF_028130
Uncharacterized protein; Belongs to the GroES chaperonin family.
 
 
 0.729
SOVF_208160
Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
  
  
 0.721
SOVF_117520
Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
     
 0.715
SOVF_125410
Uncharacterized protein.
  
 0.681
SOVF_109510
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.681
SOVF_024700
Uncharacterized protein.
  
 0.681
SOVF_060100
Uncharacterized protein.
  
 
 0.648
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.