STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_135980Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)    
Predicted Functional Partners:
SOVF_175620
Uncharacterized protein; Belongs to the synaptobrevin family.
  
  
 
0.902
SOVF_157460
Uncharacterized protein; Belongs to the synaptobrevin family.
  
  
 
0.902
SOVF_136430
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.624
SOVF_055990
t-SNARE coiled-coil homology domain-containing protein.
    
 0.624
SOVF_025500
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.620
SOVF_209030
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
  
 
 
 0.618
SOVF_075360
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
  
 
 
 0.611
SOVF_136460
Uncharacterized protein.
    
 0.600
SOVF_077720
t-SNARE coiled-coil homology domain-containing protein.
    
 0.575
SOVF_046990
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.548
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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