STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_135210C2 domain-containing protein. (2096 aa)    
Predicted Functional Partners:
SOVF_155330
Uncharacterized protein.
  
   
 0.621
SOVF_136700
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
   
 
 0.614
SOVF_027780
Uncharacterized protein.
  
   
 0.610
SOVF_083230
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
   
 
 0.539
SOVF_027320
Uncharacterized protein.
      
 0.459
SOVF_112480
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
  
     0.450
SOVF_115270
CN hydrolase domain-containing protein.
      
 0.449
SOVF_202260
SAP domain-containing protein.
  
     0.430
SOVF_124320
Uncharacterized protein; Belongs to the DOCK family.
  
     0.426
SOVF_063030
RING-type domain-containing protein.
  
 
   0.422
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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