STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_123990Uncharacterized protein; Belongs to the MT-A70-like family. (432 aa)    
Predicted Functional Partners:
SOVF_110780
Uncharacterized protein; Belongs to the MT-A70-like family.
      
0.608
SOVF_024550
Uncharacterized protein.
      
 0.607
SOVF_016930
Uncharacterized protein; Belongs to the MT-A70-like family.
      
 0.607
SOVF_150900
MTS domain-containing protein.
      
 0.603
SOVF_121890
Uncharacterized protein.
      
 0.583
SOVF_055850
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
      
 0.580
SOVF_158880
Uncharacterized protein.
      
 0.477
SOVF_161330
MTS domain-containing protein.
      
 0.459
SOVF_184500
Fe2OG dioxygenase domain-containing protein.
   
  
 0.427
SOVF_119180
Fe2OG dioxygenase domain-containing protein.
   
  
 0.427
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.