Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_008870 | SOVF_052740 | A0A0K9S085 | A0A0K9RN58 | Uncharacterized protein. | Uncharacterized protein. | 0.436 |
SOVF_008870 | SOVF_065980 | A0A0K9S085 | A0A0K9RHG8 | Uncharacterized protein. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.567 |
SOVF_008870 | SOVF_087070 | A0A0K9S085 | A0A0K9RCF6 | Uncharacterized protein. | Uncharacterized protein. | 0.436 |
SOVF_008870 | SOVF_091840 | A0A0K9S085 | A0A0K9R9F0 | Uncharacterized protein. | 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.950 |
SOVF_008870 | SOVF_115730 | A0A0K9S085 | A0A0K9R3Z5 | Uncharacterized protein. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.970 |
SOVF_008870 | SOVF_119910 | A0A0K9S085 | A0A0K9R0Q7 | Uncharacterized protein. | PKS_AT domain-containing protein. | 0.956 |
SOVF_008870 | SOVF_131120 | A0A0K9S085 | A0A0K9QZ99 | Uncharacterized protein. | PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.971 |
SOVF_008870 | SOVF_196450 | A0A0K9S085 | A0A0K9QE19 | Uncharacterized protein. | PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.960 |
SOVF_052740 | SOVF_008870 | A0A0K9RN58 | A0A0K9S085 | Uncharacterized protein. | Uncharacterized protein. | 0.436 |
SOVF_052740 | SOVF_065980 | A0A0K9RN58 | A0A0K9RHG8 | Uncharacterized protein. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.946 |
SOVF_052740 | SOVF_087070 | A0A0K9RN58 | A0A0K9RCF6 | Uncharacterized protein. | Uncharacterized protein. | 0.900 |
SOVF_052740 | SOVF_091840 | A0A0K9RN58 | A0A0K9R9F0 | Uncharacterized protein. | 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.937 |
SOVF_052740 | SOVF_115730 | A0A0K9RN58 | A0A0K9R3Z5 | Uncharacterized protein. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.987 |
SOVF_052740 | SOVF_119910 | A0A0K9RN58 | A0A0K9R0Q7 | Uncharacterized protein. | PKS_AT domain-containing protein. | 0.985 |
SOVF_052740 | SOVF_131120 | A0A0K9RN58 | A0A0K9QZ99 | Uncharacterized protein. | PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.986 |
SOVF_052740 | SOVF_146610 | A0A0K9RN58 | A0A0K9QSF8 | Uncharacterized protein. | Uncharacterized protein. | 0.954 |
SOVF_052740 | SOVF_196450 | A0A0K9RN58 | A0A0K9QE19 | Uncharacterized protein. | PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.985 |
SOVF_052740 | accD | A0A0K9RN58 | Q9M3L7 | Uncharacterized protein. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.934 |
SOVF_065980 | SOVF_008870 | A0A0K9RHG8 | A0A0K9S085 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Uncharacterized protein. | 0.567 |
SOVF_065980 | SOVF_052740 | A0A0K9RHG8 | A0A0K9RN58 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Uncharacterized protein. | 0.946 |
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