STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_112860Uncharacterized protein. (627 aa)    
Predicted Functional Partners:
SOVF_151310
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
   
 0.993
SOVF_014960
AAA domain-containing protein.
   
0.993
SOVF_025430
AAA domain-containing protein.
    
 0.992
SOVF_051790
Checkpoint protein; Belongs to the HUS1 family.
   
 0.990
SOVF_070860
Uncharacterized protein; Belongs to the rad9 family.
   
 0.976
SOVF_066060
DDT domain-containing protein.
   
 0.974
SOVF_091650
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.970
SOVF_072760
3'-5' exonuclease domain-containing protein.
   
 0.965
SOVF_000900
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.965
SOVF_192210
AAA domain-containing protein.
   
0.960
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.