STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_111980mRNA cap 0 methyltransferase domain-containing protein. (375 aa)    
Predicted Functional Partners:
SOVF_092280
mRNA cap guanine-N7 methyltransferase.
     
0.905
SOVF_183110
Uncharacterized protein.
   
   0.698
SOVF_178550
Uncharacterized protein.
   
   0.673
SOVF_101890
Uncharacterized protein.
   
   0.673
SOVF_064180
Uncharacterized protein.
   
   0.553
SOVF_153760
MIF4G domain-containing protein.
     
  0.540
SOVF_060000
Nuclear cap-binding protein subunit 2.
     
  0.540
SOVF_105560
Uncharacterized protein.
   
   0.537
SOVF_070240
zf-CHCC domain-containing protein.
   
   0.534
SOVF_088800
L51_S25_CI-B8 domain-containing protein.
   
   0.525
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.