STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_111200LNS2 domain-containing protein. (1013 aa)    
Predicted Functional Partners:
SOVF_148280
Uncharacterized protein.
    
 0.960
SOVF_081600
O-acyltransferase.
    
 0.944
SOVF_209470
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.941
SOVF_099190
acidPPc domain-containing protein.
    
 0.939
SOVF_091360
PNPLA domain-containing protein.
     
 0.939
SOVF_142690
Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.
     
 0.935
SOVF_024070
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.935
SOVF_137240
acidPPc domain-containing protein.
    
 0.933
SOVF_158080
Uncharacterized protein.
     
 0.917
SOVF_114960
Uncharacterized protein.
    
 0.916
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.