STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_115840Uncharacterized protein. (508 aa)    
Predicted Functional Partners:
SOVF_177100
RECA_2 domain-containing protein.
  
 
 0.750
SOVF_000050
Uncharacterized protein.
    
 
 0.676
SOVF_135260
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.673
SOVF_184080
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.671
SOVF_072760
3'-5' exonuclease domain-containing protein.
  
 
 0.618
SOVF_000900
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.618
SOVF_082430
Zinc-hook domain-containing protein.
  
 
 0.563
SOVF_091650
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.559
SOVF_150650
Uncharacterized protein.
 
 
 
 0.551
SOVF_124980
Uncharacterized protein.
    
 
 0.538
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.