STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_109250Lipase_GDSL domain-containing protein. (425 aa)    
Predicted Functional Partners:
SOVF_081510
RING-type domain-containing protein.
    
 0.808
SOVF_053170
RING-type domain-containing protein.
    
 0.808
SOVF_126430
Uncharacterized protein.
    
 0.684
SOVF_115630
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.684
SOVF_101470
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.684
SOVF_082740
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.684
SOVF_061340
Skp1 domain-containing protein; Belongs to the SKP1 family.
    
 0.684
SOVF_017040
Skp1 domain-containing protein; Belongs to the SKP1 family.
    
 0.684
SOVF_194910
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.681
SOVF_176480
Uncharacterized protein.
    
 0.681
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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