STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_101500Uncharacterized protein. (603 aa)    
Predicted Functional Partners:
SOVF_104610
Uncharacterized protein.
  
 
0.930
SOVF_136210
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.719
SOVF_083090
Uncharacterized protein.
      
 0.705
SOVF_111280
Chorismate_bind domain-containing protein.
   
  
 0.581
SOVF_180800
Uncharacterized protein.
      
 0.570
SOVF_155370
RPW8 domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
   
 0.535
SOVF_181920
DUF4220 domain-containing protein.
  
 
   0.496
SOVF_134250
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.449
SOVF_172280
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.441
SOVF_154910
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.441
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.