STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_098340Uncharacterized protein. (309 aa)    
Predicted Functional Partners:
SOVF_146420
2-Hacid_dh_C domain-containing protein.
     
 0.626
SOVF_126090
Cytochrome b5 heme-binding domain-containing protein.
     
 0.530
SOVF_080620
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.487
SOVF_016920
Uncharacterized protein.
   
  
 0.483
SOVF_055430
Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.
    
 
 0.476
SOVF_038580
Str_synth domain-containing protein.
      
 0.474
SOVF_007940
Uncharacterized protein.
    
 
 0.465
SOVF_147880
Protein kinase domain-containing protein.
    
 
 0.461
SOVF_097640
acidPPc domain-containing protein.
    
 0.445
SOVF_155570
FA_desaturase domain-containing protein.
     
 0.440
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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