STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_103850Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
SOVF_022220
Uncharacterized protein.
  
 
 0.719
SOVF_158420
Uncharacterized protein.
   
 0.660
SOVF_155990
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.590
SOVF_125380
Semialdhyde_dh domain-containing protein.
     
 0.589
SOVF_012560
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
     
 0.566
SOVF_199600
Cupin_2 domain-containing protein.
  
 
 0.555
SOVF_212710
Uncharacterized protein.
    
 0.553
SOVF_021650
ACT domain-containing protein.
    
 0.553
SOVF_145410
CN hydrolase domain-containing protein.
  
 
 0.549
SOVF_141140
Uncharacterized protein.
   
  
 0.548
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
Server load: low (22%) [HD]