STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_100940PWWP domain-containing protein. (1129 aa)    
Predicted Functional Partners:
SOVF_136250
Uncharacterized protein.
  
 0.706
SOVF_031030
Uncharacterized protein.
   
 0.666
SOVF_034270
Uncharacterized protein.
   
 0.618
SOVF_039360
Uncharacterized protein.
    
 0.582
SOVF_204940
Uncharacterized protein.
    
 0.509
SOVF_179850
Lactamase_B domain-containing protein.
    
 0.509
SOVF_165660
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.503
SOVF_159160
TPR_REGION domain-containing protein.
   
 0.493
SOVF_166870
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
    
 0.489
SOVF_100230
RPOL4c domain-containing protein.
   
  0.489
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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