STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_086620OTU domain-containing protein. (346 aa)    
Predicted Functional Partners:
SOVF_166130
OTU domain-containing protein.
      
0.575
SOVF_137140
OTU domain-containing protein.
      
 0.575
SOVF_156820
OTU domain-containing protein.
      
 0.573
SOVF_097120
HECT domain-containing protein.
      
 0.572
SOVF_023000
HECT domain-containing protein.
      
 0.572
SOVF_192070
Nodulin-like domain-containing protein.
      
 0.559
SOVF_164890
OTU domain-containing protein.
      
 0.476
SOVF_144170
OTU domain-containing protein.
      
 0.476
SOVF_068020
Uncharacterized protein.
      
 0.426
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.