SOVF_081530 protein (Spinacia oleracea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SOVF_081530

Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. (69 aa)

Predicted Functional Partners:

SOVF_039580

0.709

SOVF_207730

0.551

SOVF_213020

0.551

SOVF_110440

0.551

SOVF_106170

0.551

SOVF_018590

0.551

SOVF_211970

0.432

SOVF_163740

0.432

SOVF_159230

0.432

SOVF_121870

0.432

Your Current Organism:

Spinacia oleracea

NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SOVF_018590	SOVF_081530	A0A0K9RXA8	A0A0K9RCP0	Ammonium transporter.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.551
SOVF_039580	SOVF_081530	A0A0K9RSF7	A0A0K9RCP0	Uncharacterized protein.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.709
SOVF_081530	SOVF_018590	A0A0K9RCP0	A0A0K9RXA8	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Ammonium transporter.	0.551
SOVF_081530	SOVF_039580	A0A0K9RCP0	A0A0K9RSF7	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Uncharacterized protein.	0.709
SOVF_081530	SOVF_106170	A0A0K9RCP0	A0A0K9R738	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Ammonium transporter.	0.551
SOVF_081530	SOVF_110440	A0A0K9RCP0	A0A0K9R3Q8	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Ammonium transporter.	0.551
SOVF_081530	SOVF_121870	A0A0K9RCP0	A0A0K9R224	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.432
SOVF_081530	SOVF_159230	A0A0K9RCP0	A0A0K9QNI3	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.432
SOVF_081530	SOVF_163740	A0A0K9RCP0	A0A0K9QLZ5	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.432
SOVF_081530	SOVF_207730	A0A0K9RCP0	A0A0K9Q8I0	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Ammonium transporter.	0.551
SOVF_081530	SOVF_211970	A0A0K9RCP0	A0A0K9Q8Y3	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.432
SOVF_081530	SOVF_213020	A0A0K9RCP0	A0A0K9Q934	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Ammonium transporter.	0.551
SOVF_106170	SOVF_081530	A0A0K9R738	A0A0K9RCP0	Ammonium transporter.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.551
SOVF_110440	SOVF_081530	A0A0K9R3Q8	A0A0K9RCP0	Ammonium transporter.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.551
SOVF_121870	SOVF_081530	A0A0K9R224	A0A0K9RCP0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.432
SOVF_159230	SOVF_081530	A0A0K9QNI3	A0A0K9RCP0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.432
SOVF_159230	SOVF_163740	A0A0K9QNI3	A0A0K9QLZ5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.653
SOVF_159230	SOVF_211970	A0A0K9QNI3	A0A0K9Q8Y3	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.657
SOVF_163740	SOVF_081530	A0A0K9QLZ5	A0A0K9RCP0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.432
SOVF_163740	SOVF_159230	A0A0K9QLZ5	A0A0K9QNI3	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.653