STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_082060SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family. (303 aa)    
Predicted Functional Partners:
SOVF_121940
Uncharacterized protein.
 0.999
SOVF_087440
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
  
 
 
0.979
SOVF_047980
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 
 0.962
SOVF_093100
Phos_pyr_kin domain-containing protein.
   
 0.946
SOVF_188140
Uncharacterized protein.
     
 0.938
SOVF_059180
Uncharacterized protein.
     
 0.938
SOVF_136090
Pyridox_oxase_2 domain-containing protein.
     
  0.900
SOVF_087030
Uncharacterized protein.
    
 0.816
SOVF_021530
Uncharacterized protein.
    
 0.816
SOVF_082120
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.810
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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