STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_080530KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (244 aa)    
Predicted Functional Partners:
SOVF_153150
Uncharacterized protein.
   
 
 0.999
SOVF_010860
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.990
SOVF_062920
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.989
SOVF_013530
Uncharacterized protein.
   
 0.988
SOVF_022300
Uncharacterized protein.
  
 0.988
SOVF_093210
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.986
SOVF_067350
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.982
SOVF_210830
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.978
SOVF_076880
S10_plectin domain-containing protein.
   
 0.974
SOVF_029460
S10_plectin domain-containing protein.
   
 0.974
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.