Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPS1 | SOVF_049440 | P29344 | A0A0K9RML8 | 30S ribosomal protein S1, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus. Actively engaged in the initiation complex formation via a strong mRNA-binding activity. Possesses a poly(A)-binding activity which might play a role as a control element in chloroplast mRNA translation. Belongs to the bacterial ribosomal protein bS1 family. | Uncharacterized protein. | 0.473 |
RPS1 | SOVF_078990 | P29344 | A0A0K9RDJ3 | 30S ribosomal protein S1, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus. Actively engaged in the initiation complex formation via a strong mRNA-binding activity. Possesses a poly(A)-binding activity which might play a role as a control element in chloroplast mRNA translation. Belongs to the bacterial ribosomal protein bS1 family. | VDE domain-containing protein. | 0.714 |
RPS1 | SOVF_144870 | P29344 | A0A0K9QSZ1 | 30S ribosomal protein S1, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus. Actively engaged in the initiation complex formation via a strong mRNA-binding activity. Possesses a poly(A)-binding activity which might play a role as a control element in chloroplast mRNA translation. Belongs to the bacterial ribosomal protein bS1 family. | Uncharacterized protein. | 0.473 |
SOVF_036160 | SOVF_061630 | A0A0K9RTT3 | A0A0K9RIY8 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Uncharacterized protein; Belongs to the cytochrome P450 family. | 0.925 |
SOVF_036160 | SOVF_077800 | A0A0K9RTT3 | A0A0K9RDW0 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. | 0.940 |
SOVF_036160 | SOVF_078990 | A0A0K9RTT3 | A0A0K9RDJ3 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | VDE domain-containing protein. | 0.945 |
SOVF_036160 | SOVF_115640 | A0A0K9RTT3 | A0A0K9R3L9 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | 0.469 |
SOVF_036160 | SOVF_121950 | A0A0K9RTT3 | A0A0K9R005 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Uncharacterized protein. | 0.951 |
SOVF_036160 | SOVF_122230 | A0A0K9RTT3 | A0A0K9R228 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Uncharacterized protein. | 0.478 |
SOVF_036160 | SOVF_173090 | A0A0K9RTT3 | A0A0K9QKU3 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Uncharacterized protein. | 0.901 |
SOVF_049440 | RPS1 | A0A0K9RML8 | P29344 | Uncharacterized protein. | 30S ribosomal protein S1, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus. Actively engaged in the initiation complex formation via a strong mRNA-binding activity. Possesses a poly(A)-binding activity which might play a role as a control element in chloroplast mRNA translation. Belongs to the bacterial ribosomal protein bS1 family. | 0.473 |
SOVF_049440 | SOVF_061630 | A0A0K9RML8 | A0A0K9RIY8 | Uncharacterized protein. | Uncharacterized protein; Belongs to the cytochrome P450 family. | 0.508 |
SOVF_049440 | SOVF_077800 | A0A0K9RML8 | A0A0K9RDW0 | Uncharacterized protein. | Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. | 0.665 |
SOVF_049440 | SOVF_078990 | A0A0K9RML8 | A0A0K9RDJ3 | Uncharacterized protein. | VDE domain-containing protein. | 0.786 |
SOVF_049440 | SOVF_115640 | A0A0K9RML8 | A0A0K9R3L9 | Uncharacterized protein. | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | 0.692 |
SOVF_049440 | SOVF_121950 | A0A0K9RML8 | A0A0K9R005 | Uncharacterized protein. | Uncharacterized protein. | 0.544 |
SOVF_049440 | SOVF_122230 | A0A0K9RML8 | A0A0K9R228 | Uncharacterized protein. | Uncharacterized protein. | 0.575 |
SOVF_061630 | SOVF_036160 | A0A0K9RIY8 | A0A0K9RTT3 | Uncharacterized protein; Belongs to the cytochrome P450 family. | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | 0.925 |
SOVF_061630 | SOVF_049440 | A0A0K9RIY8 | A0A0K9RML8 | Uncharacterized protein; Belongs to the cytochrome P450 family. | Uncharacterized protein. | 0.508 |
SOVF_061630 | SOVF_077800 | A0A0K9RIY8 | A0A0K9RDW0 | Uncharacterized protein; Belongs to the cytochrome P450 family. | Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. | 0.963 |
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