Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPL3 | SOVF_011760 | P82191 | A0A0K9S167 | 50S ribosomal protein L3, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the universal ribosomal protein uL3 family. | Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. | 0.910 |
RPL3 | SOVF_037520 | P82191 | A0A0K9RR98 | 50S ribosomal protein L3, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the universal ribosomal protein uL3 family. | Uncharacterized protein. | 0.912 |
RPL3 | SOVF_071430 | P82191 | A0A0K9RFW1 | 50S ribosomal protein L3, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the universal ribosomal protein uL3 family. | Uncharacterized protein. | 0.567 |
RPL3 | SOVF_097800 | P82191 | A0A0K9R7G2 | 50S ribosomal protein L3, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the universal ribosomal protein uL3 family. | Uncharacterized protein. | 0.909 |
SOVF_011760 | RPL3 | A0A0K9S167 | P82191 | Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L3, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the universal ribosomal protein uL3 family. | 0.910 |
SOVF_011760 | SOVF_037520 | A0A0K9S167 | A0A0K9RR98 | Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. | Uncharacterized protein. | 0.929 |
SOVF_011760 | SOVF_071430 | A0A0K9S167 | A0A0K9RFW1 | Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. | Uncharacterized protein. | 0.567 |
SOVF_011760 | SOVF_097800 | A0A0K9S167 | A0A0K9R7G2 | Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. | Uncharacterized protein. | 0.926 |
SOVF_012070 | SOVF_045300 | A0A0K9RZ59 | A0A0K9RNW8 | Uncharacterized protein; Belongs to the peptidase S8 family. | BHLH domain-containing protein. | 0.444 |
SOVF_012070 | SOVF_049530 | A0A0K9RZ59 | A0A0K9RPC1 | Uncharacterized protein; Belongs to the peptidase S8 family. | Uncharacterized protein. | 0.573 |
SOVF_012070 | SOVF_071430 | A0A0K9RZ59 | A0A0K9RFW1 | Uncharacterized protein; Belongs to the peptidase S8 family. | Uncharacterized protein. | 0.571 |
SOVF_012070 | SOVF_081750 | A0A0K9RZ59 | A0A0K9RCJ9 | Uncharacterized protein; Belongs to the peptidase S8 family. | BHLH domain-containing protein. | 0.589 |
SOVF_012070 | SOVF_092940 | A0A0K9RZ59 | A0A0K9RA73 | Uncharacterized protein; Belongs to the peptidase S8 family. | BHLH domain-containing protein. | 0.478 |
SOVF_012070 | SOVF_113420 | A0A0K9RZ59 | A0A0K9R2R5 | Uncharacterized protein; Belongs to the peptidase S8 family. | Uncharacterized protein. | 0.426 |
SOVF_037520 | RPL3 | A0A0K9RR98 | P82191 | Uncharacterized protein. | 50S ribosomal protein L3, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the universal ribosomal protein uL3 family. | 0.912 |
SOVF_037520 | SOVF_011760 | A0A0K9RR98 | A0A0K9S167 | Uncharacterized protein. | Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. | 0.929 |
SOVF_037520 | SOVF_071430 | A0A0K9RR98 | A0A0K9RFW1 | Uncharacterized protein. | Uncharacterized protein. | 0.624 |
SOVF_037520 | SOVF_097800 | A0A0K9RR98 | A0A0K9R7G2 | Uncharacterized protein. | Uncharacterized protein. | 0.969 |
SOVF_045300 | SOVF_012070 | A0A0K9RNW8 | A0A0K9RZ59 | BHLH domain-containing protein. | Uncharacterized protein; Belongs to the peptidase S8 family. | 0.444 |
SOVF_045300 | SOVF_049530 | A0A0K9RNW8 | A0A0K9RPC1 | BHLH domain-containing protein. | Uncharacterized protein. | 0.573 |
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