STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_063380TRANSKETOLASE_1 domain-containing protein. (740 aa)    
Predicted Functional Partners:
SOVF_021530
Uncharacterized protein.
 
 0.998
SOVF_087030
Uncharacterized protein.
  
 0.996
SOVF_207280
Uncharacterized protein.
  
 0.973
SOVF_136520
Uncharacterized protein.
  
 0.973
SOVF_063340
FBPase domain-containing protein.
  
 
 0.973
SOVF_068430
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
  
 
 0.971
SOVF_129090
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
  
 
 0.970
PFK
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.967
SOVF_178150
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.962
SOVF_099870
Gp_dh_N domain-containing protein.
  
 
 0.961
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.