STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_062650Uncharacterized protein. (339 aa)    
Predicted Functional Partners:
SOVF_048010
Uncharacterized protein.
  
  
 
0.907
SOVF_020280
Uncharacterized protein.
  
  
 
0.904
SOVF_077310
Pathogenesis-related protein; Belongs to the BetVI family.
      
 0.648
SOVF_195840
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.553
SOVF_038370
Uncharacterized protein; Belongs to the DEAD box helicase family.
      
 0.553
SOVF_131780
Inositol-1-monophosphatase.
      
 0.552
SOVF_153970
Eukaryotic translation initiation factor 5A.
      
 0.445
SOVF_108510
Eukaryotic translation initiation factor 5A.
      
 0.445
SOVF_048500
Eukaryotic translation initiation factor 5A.
      
 0.445
SOVF_207730
Ammonium transporter.
      
 0.414
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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