Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_025500 | SOVF_053470 | A0A0K9RV61 | A0A0K9RLA6 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | CNH domain-containing protein. | 0.952 |
SOVF_025500 | SOVF_060920 | A0A0K9RV61 | A0A0K9RJ76 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | Vps8 domain-containing protein. | 0.962 |
SOVF_025500 | SOVF_080170 | A0A0K9RV61 | A0A0K9RCZ3 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic. | 0.992 |
SOVF_025500 | SOVF_100400 | A0A0K9RV61 | A0A0K9R6S1 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | Uncharacterized protein. | 0.922 |
SOVF_025500 | SOVF_146110 | A0A0K9RV61 | A0A0K9QSP0 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | CNH domain-containing protein. | 0.952 |
SOVF_025500 | SOVF_150510 | A0A0K9RV61 | A0A0K9QSW3 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | RING-type domain-containing protein. | 0.962 |
SOVF_025500 | SOVF_184220 | A0A0K9RV61 | A0A0K9QFT8 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | Pep3_Vps18 domain-containing protein. | 0.993 |
SOVF_025500 | SOVF_209030 | A0A0K9RV61 | A0A0K9Q880 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | 0.943 |
SOVF_025500 | SOVF_214940 | A0A0K9RV61 | A0A0K9Q8I2 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | RING-type domain-containing protein. | 0.922 |
SOVF_025500 | SOVF_216660 | A0A0K9RV61 | A0A0K9Q6K3 | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | Uncharacterized protein. | 0.963 |
SOVF_053470 | SOVF_025500 | A0A0K9RLA6 | A0A0K9RV61 | CNH domain-containing protein. | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | 0.952 |
SOVF_053470 | SOVF_060920 | A0A0K9RLA6 | A0A0K9RJ76 | CNH domain-containing protein. | Vps8 domain-containing protein. | 0.858 |
SOVF_053470 | SOVF_080170 | A0A0K9RLA6 | A0A0K9RCZ3 | CNH domain-containing protein. | Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic. | 0.952 |
SOVF_053470 | SOVF_100400 | A0A0K9RLA6 | A0A0K9R6S1 | CNH domain-containing protein. | Uncharacterized protein. | 0.879 |
SOVF_053470 | SOVF_150510 | A0A0K9RLA6 | A0A0K9QSW3 | CNH domain-containing protein. | RING-type domain-containing protein. | 0.858 |
SOVF_053470 | SOVF_184220 | A0A0K9RLA6 | A0A0K9QFT8 | CNH domain-containing protein. | Pep3_Vps18 domain-containing protein. | 0.950 |
SOVF_053470 | SOVF_209030 | A0A0K9RLA6 | A0A0K9Q880 | CNH domain-containing protein. | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | 0.861 |
SOVF_053470 | SOVF_214940 | A0A0K9RLA6 | A0A0K9Q8I2 | CNH domain-containing protein. | RING-type domain-containing protein. | 0.879 |
SOVF_053470 | SOVF_216660 | A0A0K9RLA6 | A0A0K9Q6K3 | CNH domain-containing protein. | Uncharacterized protein. | 0.879 |
SOVF_060920 | SOVF_025500 | A0A0K9RJ76 | A0A0K9RV61 | Vps8 domain-containing protein. | Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family. | 0.962 |
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