LSM1 protein (Spinacia oleracea) - STRING interaction network

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Score

LSM1

U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)

Predicted Functional Partners:

LSM3

0.997

SOVF_027350

0.997

LSM5

0.996

LSM4

0.994

SOVF_157740

0.993

SOVF_146340

0.981

SOVF_055240

0.981

SOVF_167160

0.974

SOVF_057190

0.974

SOVF_079630

0.966

Your Current Organism:

Spinacia oleracea

NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM3	A0A0K9RLI9	A0A0K9QI65	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
LSM1	LSM4	A0A0K9RLI9	A0A0K9RLZ5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
LSM1	LSM5	A0A0K9RLI9	A0A0K9QGX5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.996
LSM1	SOVF_027350	A0A0K9RLI9	A0A0K9RWD5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	0.997
LSM1	SOVF_055240	A0A0K9RLI9	A0A0K9RMK0	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Sm domain-containing protein.	0.981
LSM1	SOVF_057190	A0A0K9RLI9	A0A0K9RM24	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.974
LSM1	SOVF_079630	A0A0K9RLI9	A0A0K9RF22	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.966
LSM1	SOVF_146340	A0A0K9RLI9	A0A0K9QSL6	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Sm domain-containing protein.	0.981
LSM1	SOVF_157740	A0A0K9RLI9	A0A0K9QP02	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Sm domain-containing protein.	0.993
LSM1	SOVF_167160	A0A0K9RLI9	A0A0K9QL22	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.974
LSM3	LSM1	A0A0K9QI65	A0A0K9RLI9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.997
LSM3	LSM4	A0A0K9QI65	A0A0K9RLZ5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	LSM5	A0A0K9QI65	A0A0K9QGX5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM3	SOVF_027350	A0A0K9QI65	A0A0K9RWD5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	0.999
LSM3	SOVF_055240	A0A0K9QI65	A0A0K9RMK0	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.996
LSM3	SOVF_057190	A0A0K9QI65	A0A0K9RM24	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.873
LSM3	SOVF_079630	A0A0K9QI65	A0A0K9RF22	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.964
LSM3	SOVF_146340	A0A0K9QI65	A0A0K9QSL6	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.984
LSM3	SOVF_157740	A0A0K9QI65	A0A0K9QP02	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.999
LSM3	SOVF_167160	A0A0K9QI65	A0A0K9QL22	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.873