Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_015680 | SOVF_022760 | A0A0K9RXZ4 | A0A0K9RVY2 | RRM domain-containing protein. | Brix domain-containing protein. | 0.999 |
SOVF_015680 | SOVF_043330 | A0A0K9RXZ4 | A0A0K9RPM6 | RRM domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.998 |
SOVF_015680 | SOVF_051010 | A0A0K9RXZ4 | A0A0K9RNU9 | RRM domain-containing protein. | Brix domain-containing protein. | 0.999 |
SOVF_015680 | SOVF_096230 | A0A0K9RXZ4 | A0A0K9R811 | RRM domain-containing protein. | Brix domain-containing protein. | 0.999 |
SOVF_015680 | SOVF_104200 | A0A0K9RXZ4 | A0A0K9R5L5 | RRM domain-containing protein. | PUM-HD domain-containing protein. | 0.999 |
SOVF_015680 | SOVF_105610 | A0A0K9RXZ4 | A0A0K9R576 | RRM domain-containing protein. | Uncharacterized protein. | 0.999 |
SOVF_015680 | SOVF_108300 | A0A0K9RXZ4 | A0A0K9R6A1 | RRM domain-containing protein. | Brix domain-containing protein. | 0.999 |
SOVF_015680 | SOVF_169610 | A0A0K9RXZ4 | A0A0K9QM97 | RRM domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
SOVF_015680 | SOVF_182980 | A0A0K9RXZ4 | A0A0K9QHR8 | RRM domain-containing protein. | Uncharacterized protein. | 0.930 |
SOVF_015680 | SOVF_207440 | A0A0K9RXZ4 | A0A0K9Q8Q4 | RRM domain-containing protein. | Uncharacterized protein. | 0.999 |
SOVF_022760 | SOVF_015680 | A0A0K9RVY2 | A0A0K9RXZ4 | Brix domain-containing protein. | RRM domain-containing protein. | 0.999 |
SOVF_022760 | SOVF_043330 | A0A0K9RVY2 | A0A0K9RPM6 | Brix domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.993 |
SOVF_022760 | SOVF_051010 | A0A0K9RVY2 | A0A0K9RNU9 | Brix domain-containing protein. | Brix domain-containing protein. | 0.999 |
SOVF_022760 | SOVF_096230 | A0A0K9RVY2 | A0A0K9R811 | Brix domain-containing protein. | Brix domain-containing protein. | 0.966 |
SOVF_022760 | SOVF_104200 | A0A0K9RVY2 | A0A0K9R5L5 | Brix domain-containing protein. | PUM-HD domain-containing protein. | 0.926 |
SOVF_022760 | SOVF_105610 | A0A0K9RVY2 | A0A0K9R576 | Brix domain-containing protein. | Uncharacterized protein. | 0.975 |
SOVF_022760 | SOVF_108300 | A0A0K9RVY2 | A0A0K9R6A1 | Brix domain-containing protein. | Brix domain-containing protein. | 0.996 |
SOVF_022760 | SOVF_169610 | A0A0K9RVY2 | A0A0K9QM97 | Brix domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.941 |
SOVF_022760 | SOVF_182980 | A0A0K9RVY2 | A0A0K9QHR8 | Brix domain-containing protein. | Uncharacterized protein. | 0.993 |
SOVF_022760 | SOVF_207440 | A0A0K9RVY2 | A0A0K9Q8Q4 | Brix domain-containing protein. | Uncharacterized protein. | 0.998 |
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