Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_000690 | SOVF_016890 | A0A0K9R713 | A0A0K9RXN3 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.600 |
SOVF_000690 | SOVF_042820 | A0A0K9R713 | A0A0K9RPM2 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA). | 0.822 |
SOVF_000690 | SOVF_121200 | A0A0K9R713 | A0A0K9R032 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.982 |
SOVF_016890 | SOVF_000690 | A0A0K9RXN3 | A0A0K9R713 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.600 |
SOVF_016890 | SOVF_036770 | A0A0K9RXN3 | A0A0K9RTC2 | Uncharacterized protein. | Uncharacterized protein. | 0.437 |
SOVF_016890 | SOVF_042820 | A0A0K9RXN3 | A0A0K9RPM2 | Uncharacterized protein. | Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA). | 0.730 |
SOVF_016890 | SOVF_071360 | A0A0K9RXN3 | A0A0K9RHC5 | Uncharacterized protein. | Uncharacterized protein. | 0.834 |
SOVF_016890 | SOVF_072290 | A0A0K9RXN3 | A0A0K9RHF6 | Uncharacterized protein. | Bms1-type G domain-containing protein. | 0.585 |
SOVF_016890 | SOVF_108300 | A0A0K9RXN3 | A0A0K9R6A1 | Uncharacterized protein. | Brix domain-containing protein. | 0.857 |
SOVF_016890 | SOVF_131180 | A0A0K9RXN3 | A0A0K9QYU6 | Uncharacterized protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
SOVF_016890 | SOVF_182980 | A0A0K9RXN3 | A0A0K9QHR8 | Uncharacterized protein. | Uncharacterized protein. | 0.989 |
SOVF_036770 | SOVF_016890 | A0A0K9RTC2 | A0A0K9RXN3 | Uncharacterized protein. | Uncharacterized protein. | 0.437 |
SOVF_036770 | SOVF_042820 | A0A0K9RTC2 | A0A0K9RPM2 | Uncharacterized protein. | Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA). | 0.553 |
SOVF_036770 | SOVF_071360 | A0A0K9RTC2 | A0A0K9RHC5 | Uncharacterized protein. | Uncharacterized protein. | 0.728 |
SOVF_036770 | SOVF_072290 | A0A0K9RTC2 | A0A0K9RHF6 | Uncharacterized protein. | Bms1-type G domain-containing protein. | 0.715 |
SOVF_036770 | SOVF_108300 | A0A0K9RTC2 | A0A0K9R6A1 | Uncharacterized protein. | Brix domain-containing protein. | 0.518 |
SOVF_036770 | SOVF_131180 | A0A0K9RTC2 | A0A0K9QYU6 | Uncharacterized protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.728 |
SOVF_036770 | SOVF_182980 | A0A0K9RTC2 | A0A0K9QHR8 | Uncharacterized protein. | Uncharacterized protein. | 0.720 |
SOVF_042820 | SOVF_000690 | A0A0K9RPM2 | A0A0K9R713 | Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA). | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.822 |
SOVF_042820 | SOVF_016890 | A0A0K9RPM2 | A0A0K9RXN3 | Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA). | Uncharacterized protein. | 0.730 |
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