STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_048390Exonuclease domain-containing protein. (490 aa)    
Predicted Functional Partners:
SOVF_152700
Exonuclease domain-containing protein.
   
 0.933
SOVF_172730
Exonuclease domain-containing protein.
  
 
 
0.907
SOVF_184080
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.742
SOVF_135260
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.742
SOVF_094360
Uncharacterized protein.
  
 
 0.602
SOVF_119600
Ipi1_N domain-containing protein.
   
 
  0.543
SOVF_028840
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
     
 0.500
SOVF_055770
Glutamine amidotransferase type-1 domain-containing protein.
   
 
 0.489
SOVF_016620
Glutamine amidotransferase type-1 domain-containing protein.
   
 
 0.489
SOVF_104140
Uncharacterized protein.
   
 0.488
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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