STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_041580Uncharacterized protein. (145 aa)    
Predicted Functional Partners:
SOVF_209870
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.848
SOVF_182530
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.848
SOVF_127940
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.848
SOVF_183640
Uncharacterized protein; Belongs to the GST superfamily.
     
 0.743
SOVF_007040
Uncharacterized protein.
     
 0.719
SOVF_047190
Thioredoxin domain-containing protein.
   
 0.704
SOVF_178510
Glutathione reductase; Maintains high levels of reduced glutathione.
   
 
 0.697
SOVF_069250
Glutathione reductase; Maintains high levels of reduced glutathione.
   
 
 0.697
SOVF_068250
Glutathione synthetase.
    
 0.693
SOVF_157760
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.670
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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