STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_040790t-SNARE coiled-coil homology domain-containing protein. (318 aa)    
Predicted Functional Partners:
SOVF_139560
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.994
SOVF_029580
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.994
SOVF_108900
t-SNARE coiled-coil homology domain-containing protein.
   
 0.993
SOVF_028670
t-SNARE coiled-coil homology domain-containing protein.
   
 0.993
SOVF_069570
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.986
SOVF_038330
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.986
SOVF_001990
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.986
SOVF_140920
Uncharacterized protein.
    
 0.970
SOVF_136230
Uncharacterized protein.
    
 0.964
SOVF_028220
Uncharacterized protein.
    
 0.964
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.