STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_044780Uncharacterized protein. (1030 aa)    
Predicted Functional Partners:
SOVF_002550
RuvB-like helicase; Belongs to the RuvB family.
    
 0.752
SOVF_071080
Uncharacterized protein; Belongs to the actin family.
   
 0.735
SOVF_009890
Uncharacterized protein; Belongs to the actin family.
    
 0.723
SOVF_077630
Uncharacterized protein.
  
0.683
SOVF_023900
DNA polymerase.
  
 0.668
SOVF_211070
ARID domain-containing protein.
    
 0.666
SOVF_061930
Uncharacterized protein.
    
 0.666
SOVF_184080
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.647
SOVF_135260
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.647
SOVF_180850
Helicase ATP-binding domain-containing protein.
  
 
 0.634
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.