STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_042630Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
SOVF_136610
Uncharacterized protein.
   
 0.941
SOVF_132200
Uncharacterized protein.
   
 0.941
SOVF_216800
Uncharacterized protein.
   
 0.899
SOVF_086580
Uncharacterized protein.
   
 0.821
SOVF_146150
Uncharacterized protein.
    
 0.795
SOVF_144160
Uncharacterized protein.
    
 0.795
SOVF_154500
Tim44 domain-containing protein.
    
 0.737
SOVF_127770
Tim44 domain-containing protein.
    
 0.737
SOVF_143620
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
   
 0.726
SOVF_162260
FCP1 homology domain-containing protein.
   
 0.725
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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