STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_041970Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family. (468 aa)    
Predicted Functional Partners:
AP3
APETALA3.
    
 
 0.602
SOVF_199010
F-box domain-containing protein.
    
 
 0.589
SOVF_098320
Uncharacterized protein.
    
 
 0.576
SOVF_027320
Uncharacterized protein.
      
 0.572
SOVF_198160
GRAS domain-containing protein; Belongs to the GRAS family.
      
 0.564
SOVF_172970
SBP-type domain-containing protein.
      
 0.557
SOVF_021810
Uncharacterized protein.
      
 0.540
SOVF_207140
Photolyase/cryptochrome alpha/beta domain-containing protein.
      
 0.489
SOVF_140790
SBP-type domain-containing protein.
      
 0.475
SOVF_093020
Uncharacterized protein.
      
 0.475
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.