STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_033120Epimerase domain-containing protein. (322 aa)    
Predicted Functional Partners:
SOVF_077970
NAD(P)-bd_dom domain-containing protein.
 0.998
SOVF_062630
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.853
SOVF_132840
Uncharacterized protein.
  
  
 0.691
SOVF_010860
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
  0.630
SOVF_083940
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.605
SOVF_013530
Uncharacterized protein.
   
  0.581
SOVF_207280
Uncharacterized protein.
    
 0.577
SOVF_136520
Uncharacterized protein.
    
 0.577
SOVF_093210
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.566
SOVF_117490
Aminotran_1_2 domain-containing protein.
  
 
 0.550
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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