STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_039610Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
SOVF_023270
Uncharacterized protein.
   
 
 0.860
SOVF_065780
Uncharacterized protein.
   
 
 0.857
SOVF_102250
Uncharacterized protein.
   
 
 0.856
SOVF_142180
Uncharacterized protein.
   
 
 0.854
SOVF_071290
Uncharacterized protein.
   
 
 0.849
SOVF_042530
Uncharacterized protein.
   
 
 0.848
psaI
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit; Belongs to the PsaI family.
    
 
 0.826
SOVF_119330
Uncharacterized protein.
   
 
 0.790
SOVF_184920
Uncharacterized protein.
   
 
 0.787
psaJ
Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits; Belongs to the PsaJ family.
    
 
 0.787
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.