Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_000400 | SOVF_030000 | A0A0K9S330 | A0A0K9RTE6 | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | Uncharacterized protein. | 0.445 |
SOVF_000400 | SOVF_041800 | A0A0K9S330 | A0A0K9RPZ2 | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | CRM1_C domain-containing protein. | 0.445 |
SOVF_000400 | SOVF_041810 | A0A0K9S330 | A0A0K9RPZ4 | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | Uncharacterized protein. | 0.445 |
SOVF_000400 | SOVF_137850 | A0A0K9S330 | A0A0K9QXD2 | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | Importin N-terminal domain-containing protein. | 0.659 |
SOVF_000400 | SOVF_140110 | A0A0K9S330 | A0A0K9QWH8 | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | Xpo1 domain-containing protein. | 0.590 |
SOVF_024900 | SOVF_030000 | A0A0K9RV13 | A0A0K9RTE6 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.435 |
SOVF_024900 | SOVF_140110 | A0A0K9RV13 | A0A0K9QWH8 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Xpo1 domain-containing protein. | 0.505 |
SOVF_030000 | SOVF_000400 | A0A0K9RTE6 | A0A0K9S330 | Uncharacterized protein. | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | 0.445 |
SOVF_030000 | SOVF_024900 | A0A0K9RTE6 | A0A0K9RV13 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.435 |
SOVF_030000 | SOVF_041800 | A0A0K9RTE6 | A0A0K9RPZ2 | Uncharacterized protein. | CRM1_C domain-containing protein. | 0.930 |
SOVF_030000 | SOVF_041810 | A0A0K9RTE6 | A0A0K9RPZ4 | Uncharacterized protein. | Uncharacterized protein. | 0.873 |
SOVF_030000 | SOVF_048500 | A0A0K9RTE6 | A0A0K9RPU7 | Uncharacterized protein. | Eukaryotic translation initiation factor 5A. | 0.571 |
SOVF_030000 | SOVF_108510 | A0A0K9RTE6 | A0A0K9R674 | Uncharacterized protein. | Eukaryotic translation initiation factor 5A. | 0.571 |
SOVF_030000 | SOVF_137850 | A0A0K9RTE6 | A0A0K9QXD2 | Uncharacterized protein. | Importin N-terminal domain-containing protein. | 0.426 |
SOVF_030000 | SOVF_140110 | A0A0K9RTE6 | A0A0K9QWH8 | Uncharacterized protein. | Xpo1 domain-containing protein. | 0.540 |
SOVF_030000 | SOVF_153970 | A0A0K9RTE6 | A0A0K9QQ33 | Uncharacterized protein. | Eukaryotic translation initiation factor 5A. | 0.571 |
SOVF_030000 | SOVF_155160 | A0A0K9RTE6 | A0A0K9QPT7 | Uncharacterized protein. | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | 0.575 |
SOVF_041800 | SOVF_000400 | A0A0K9RPZ2 | A0A0K9S330 | CRM1_C domain-containing protein. | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | 0.445 |
SOVF_041800 | SOVF_030000 | A0A0K9RPZ2 | A0A0K9RTE6 | CRM1_C domain-containing protein. | Uncharacterized protein. | 0.930 |
SOVF_041800 | SOVF_041810 | A0A0K9RPZ2 | A0A0K9RPZ4 | CRM1_C domain-containing protein. | Uncharacterized protein. | 0.908 |
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