STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_031520Uncharacterized protein. (2378 aa)    
Predicted Functional Partners:
SOVF_204790
Uncharacterized protein.
    
 0.987
SOVF_155610
Uncharacterized protein.
    
 0.987
SOVF_129300
Uncharacterized protein.
    
 0.987
SOVF_011260
Uncharacterized protein.
    
 0.987
SOVF_173660
NOT2_3_5 domain-containing protein.
   
 0.970
SOVF_105230
NOT2_3_5 domain-containing protein.
   
 0.970
SOVF_192370
RING-type domain-containing protein.
    
 0.954
SOVF_101490
RING-type domain-containing protein.
    
 0.954
SOVF_011080
Uncharacterized protein.
    
 0.954
SOVF_076840
Uncharacterized protein.
    
 0.936
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.