Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_030130 | SOVF_043330 | A0A0K9RTL6 | A0A0K9RPM6 | RRM domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.426 |
SOVF_030130 | SOVF_063940 | A0A0K9RTL6 | A0A0K9RI50 | RRM domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.426 |
SOVF_030130 | SOVF_070280 | A0A0K9RTL6 | A0A0K9RG64 | RRM domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.497 |
SOVF_030130 | SOVF_071770 | A0A0K9RTL6 | A0A0K9RFR9 | RRM domain-containing protein. | TPR_REGION domain-containing protein. | 0.426 |
SOVF_030130 | SOVF_100190 | A0A0K9RTL6 | A0A0K9R6T1 | RRM domain-containing protein. | Protein kinase domain-containing protein. | 0.567 |
SOVF_030130 | SOVF_155740 | A0A0K9RTL6 | A0A0K9QPK0 | RRM domain-containing protein. | Uncharacterized protein. | 0.426 |
SOVF_030130 | SOVF_166050 | A0A0K9RTL6 | A0A0K9QN77 | RRM domain-containing protein. | Uncharacterized protein. | 0.608 |
SOVF_043330 | SOVF_030130 | A0A0K9RPM6 | A0A0K9RTL6 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | RRM domain-containing protein. | 0.426 |
SOVF_063940 | SOVF_030130 | A0A0K9RI50 | A0A0K9RTL6 | ANK_REP_REGION domain-containing protein. | RRM domain-containing protein. | 0.426 |
SOVF_070280 | SOVF_030130 | A0A0K9RG64 | A0A0K9RTL6 | WD_REPEATS_REGION domain-containing protein. | RRM domain-containing protein. | 0.497 |
SOVF_071770 | SOVF_030130 | A0A0K9RFR9 | A0A0K9RTL6 | TPR_REGION domain-containing protein. | RRM domain-containing protein. | 0.426 |
SOVF_100190 | SOVF_030130 | A0A0K9R6T1 | A0A0K9RTL6 | Protein kinase domain-containing protein. | RRM domain-containing protein. | 0.567 |
SOVF_100190 | SOVF_155740 | A0A0K9R6T1 | A0A0K9QPK0 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.426 |
SOVF_155740 | SOVF_030130 | A0A0K9QPK0 | A0A0K9RTL6 | Uncharacterized protein. | RRM domain-containing protein. | 0.426 |
SOVF_155740 | SOVF_100190 | A0A0K9QPK0 | A0A0K9R6T1 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.426 |
SOVF_166050 | SOVF_030130 | A0A0K9QN77 | A0A0K9RTL6 | Uncharacterized protein. | RRM domain-containing protein. | 0.608 |