STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_029150Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (247 aa)    
Predicted Functional Partners:
SOVF_032830
Uncharacterized protein.
      
 0.600
SOVF_155160
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 
 0.457
SOVF_100820
Uncharacterized protein.
      
 0.457
SOVF_106150
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.447
SOVF_174370
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.434
SOVF_178760
DAO domain-containing protein.
  
  
 0.434
SOVF_115470
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.426
SOVF_094090
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.426
SOVF_210740
Uncharacterized protein; Belongs to the AAA ATPase family.
  
 
 0.420
SOVF_204810
Uncharacterized protein.
  
 
 0.420
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.