SOVF_025580 protein (Spinacia oleracea) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SOVF_025580

Uncharacterized protein. (106 aa)

Predicted Functional Partners:

SOVF_008620

0.508

SOVF_075970

0.495

SOVF_086010

0.473

SOVF_032360

0.473

SOVF_004180

0.464

SOVF_073740

0.455

SOVF_121750

0.454

SOVF_216900

0.442

SOVF_188660

0.435

SOVF_185050

0.435

Your Current Organism:

Spinacia oleracea

NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SOVF_004180	SOVF_008620	A0A0K9R4D7	A0A0K9S0E7	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
SOVF_004180	SOVF_025580	A0A0K9R4D7	A0A0K9RV56	Sm domain-containing protein.	Uncharacterized protein.	0.464
SOVF_004180	SOVF_075970	A0A0K9R4D7	A0A0K9REH8	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
SOVF_008620	SOVF_004180	A0A0K9S0E7	A0A0K9R4D7	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
SOVF_008620	SOVF_025580	A0A0K9S0E7	A0A0K9RV56	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.508
SOVF_008620	SOVF_075970	A0A0K9S0E7	A0A0K9REH8	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
SOVF_025580	SOVF_004180	A0A0K9RV56	A0A0K9R4D7	Uncharacterized protein.	Sm domain-containing protein.	0.464
SOVF_025580	SOVF_008620	A0A0K9RV56	A0A0K9S0E7	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.508
SOVF_025580	SOVF_032360	A0A0K9RV56	A0A0K9RUS4	Uncharacterized protein.	Uncharacterized protein.	0.473
SOVF_025580	SOVF_073740	A0A0K9RV56	A0A0K9RH12	Uncharacterized protein.	CHCH domain-containing protein.	0.455
SOVF_025580	SOVF_075970	A0A0K9RV56	A0A0K9REH8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.495
SOVF_025580	SOVF_086010	A0A0K9RV56	A0A0K9RB82	Uncharacterized protein.	Uncharacterized protein.	0.473
SOVF_025580	SOVF_121750	A0A0K9RV56	A0A0K9R091	Uncharacterized protein.	Protein kinase domain-containing protein.	0.454
SOVF_025580	SOVF_185050	A0A0K9RV56	A0A0K9QFG1	Uncharacterized protein.	ERCC4 domain-containing protein.	0.435
SOVF_025580	SOVF_188660	A0A0K9RV56	A0A0K9QED7	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	0.435
SOVF_025580	SOVF_216900	A0A0K9RV56	A0A0K9Q7H2	Uncharacterized protein.	Uncharacterized protein.	0.442
SOVF_032360	SOVF_025580	A0A0K9RUS4	A0A0K9RV56	Uncharacterized protein.	Uncharacterized protein.	0.473
SOVF_032360	SOVF_086010	A0A0K9RUS4	A0A0K9RB82	Uncharacterized protein.	Uncharacterized protein.	0.900
SOVF_032360	SOVF_121750	A0A0K9RUS4	A0A0K9R091	Uncharacterized protein.	Protein kinase domain-containing protein.	0.956
SOVF_073740	SOVF_025580	A0A0K9RH12	A0A0K9RV56	CHCH domain-containing protein.	Uncharacterized protein.	0.455