STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_024050MaoC-like domain-containing protein. (560 aa)    
Predicted Functional Partners:
SOVF_146500
Uncharacterized protein.
  
 0.874
SOVF_071770
TPR_REGION domain-containing protein.
   
 0.869
SOVF_200260
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.858
SOVF_210170
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.856
SOVF_125110
Thiolase_N domain-containing protein.
  
 0.856
SOVF_080620
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.856
SOVF_085380
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.800
SOVF_051350
Catalase domain-containing protein.
   
 0.795
SOVF_031600
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.795
SOVF_184210
Malate synthase; Belongs to the malate synthase family.
   
  
 0.771
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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