STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_016920Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
SOVF_097950
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
      
 0.581
SOVF_050290
Uncharacterized protein.
      
 0.573
SOVF_098340
Uncharacterized protein.
   
  
 0.483
SOVF_159040
CoA carboxyltransferase C-terminal domain-containing protein.
   
  
 0.477
SOVF_093530
CoA carboxyltransferase C-terminal domain-containing protein.
   
  
 0.477
SOVF_148910
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.476
SOVF_121960
Uncharacterized protein.
      
 0.470
SOVF_201790
Aminotran_1_2 domain-containing protein.
   
  
 0.451
SOVF_118560
Aminotran_1_2 domain-containing protein.
   
  
 0.451
SOVF_118570
Aminotran_1_2 domain-containing protein.
   
  
 0.451
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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