Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_005830 | SOVF_009430 | A0A0K9S322 | A0A0K9S073 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.740 |
SOVF_005830 | SOVF_014110 | A0A0K9S322 | A0A0K9S0C7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.716 |
SOVF_005830 | SOVF_039170 | A0A0K9S322 | A0A0K9RQU9 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Helicase C-terminal domain-containing protein. | 0.716 |
SOVF_005830 | SOVF_071150 | A0A0K9S322 | A0A0K9RHG7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.842 |
SOVF_005830 | SOVF_080270 | A0A0K9S322 | A0A0K9RD13 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | RNA helicase. | 0.748 |
SOVF_005830 | SOVF_083870 | A0A0K9S322 | A0A0K9RDU3 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | RNA helicase. | 0.748 |
SOVF_005830 | SOVF_192760 | A0A0K9S322 | A0A0K9QD56 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.999 |
SOVF_005830 | SOVF_194350 | A0A0K9S322 | A0A0K9QE95 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.999 |
SOVF_005830 | SOVF_207440 | A0A0K9S322 | A0A0K9Q8Q4 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.998 |
SOVF_005830 | SOVF_215790 | A0A0K9S322 | A0A0K9Q7R9 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Helicase C-terminal domain-containing protein. | 0.561 |
SOVF_009430 | SOVF_005830 | A0A0K9S073 | A0A0K9S322 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.740 |
SOVF_009430 | SOVF_014110 | A0A0K9S073 | A0A0K9S0C7 | Uncharacterized protein. | Uncharacterized protein. | 0.632 |
SOVF_009430 | SOVF_071150 | A0A0K9S073 | A0A0K9RHG7 | Uncharacterized protein. | Uncharacterized protein. | 0.642 |
SOVF_009430 | SOVF_080270 | A0A0K9S073 | A0A0K9RD13 | Uncharacterized protein. | RNA helicase. | 0.634 |
SOVF_009430 | SOVF_083870 | A0A0K9S073 | A0A0K9RDU3 | Uncharacterized protein. | RNA helicase. | 0.447 |
SOVF_009430 | SOVF_192760 | A0A0K9S073 | A0A0K9QD56 | Uncharacterized protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.636 |
SOVF_009430 | SOVF_194350 | A0A0K9S073 | A0A0K9QE95 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.752 |
SOVF_009430 | SOVF_207440 | A0A0K9S073 | A0A0K9Q8Q4 | Uncharacterized protein. | Uncharacterized protein. | 0.678 |
SOVF_014110 | SOVF_005830 | A0A0K9S0C7 | A0A0K9S322 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.716 |
SOVF_014110 | SOVF_009430 | A0A0K9S0C7 | A0A0K9S073 | Uncharacterized protein. | Uncharacterized protein. | 0.632 |
page 1 of 6