STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_011200Protein kinase domain-containing protein. (1203 aa)    
Predicted Functional Partners:
SOVF_134540
Uncharacterized protein.
    
 
 0.943
SOVF_006860
Nop domain-containing protein.
    
 
 0.910
SOVF_105590
Uncharacterized protein.
   
 0.878
SOVF_160530
Pinin_SDK_memA domain-containing protein.
   
 0.858
SOVF_063150
Uncharacterized protein.
   
 
0.833
SOVF_209200
EFG_C domain-containing protein.
    
 
 0.830
SOVF_077950
Tr-type G domain-containing protein.
    
 
 0.830
SOVF_004180
Sm domain-containing protein.
    
 
 0.827
SOVF_157740
Sm domain-containing protein.
    
 
 0.811
SOVF_056220
PWI domain-containing protein.
   
 
 0.798
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.