Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_004670 | SOVF_010980 | A0A0K9S1R9 | A0A0K9RZM1 | Uncharacterized protein. | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | 0.540 |
SOVF_004670 | SOVF_045980 | A0A0K9S1R9 | A0A0K9RQQ4 | Uncharacterized protein. | SGF29 C-terminal domain-containing protein. | 0.540 |
SOVF_004670 | SOVF_061860 | A0A0K9S1R9 | A0A0K9RK73 | Uncharacterized protein. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.540 |
SOVF_004670 | SOVF_071670 | A0A0K9S1R9 | A0A0K9RHD0 | Uncharacterized protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.540 |
SOVF_004670 | SOVF_144680 | A0A0K9S1R9 | A0A0K9QT30 | Uncharacterized protein. | SAGA-associated factor 11. | 0.540 |
SOVF_004670 | SOVF_168890 | A0A0K9S1R9 | A0A0K9QKJ1 | Uncharacterized protein. | Uncharacterized protein. | 0.540 |
SOVF_004670 | SOVF_176640 | A0A0K9S1R9 | A0A0K9QI52 | Uncharacterized protein. | Uncharacterized protein. | 0.540 |
SOVF_004670 | SOVF_183880 | A0A0K9S1R9 | A0A0K9QHI8 | Uncharacterized protein. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.540 |
SOVF_004670 | SOVF_184450 | A0A0K9S1R9 | A0A0K9QFN1 | Uncharacterized protein. | Uncharacterized protein. | 0.540 |
SOVF_004670 | SOVF_213880 | A0A0K9S1R9 | A0A0K9Q8S3 | Uncharacterized protein. | Uncharacterized protein. | 0.540 |
SOVF_010980 | SOVF_004670 | A0A0K9RZM1 | A0A0K9S1R9 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Uncharacterized protein. | 0.540 |
SOVF_010980 | SOVF_045980 | A0A0K9RZM1 | A0A0K9RQQ4 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | SGF29 C-terminal domain-containing protein. | 0.971 |
SOVF_010980 | SOVF_061860 | A0A0K9RZM1 | A0A0K9RK73 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.985 |
SOVF_010980 | SOVF_071670 | A0A0K9RZM1 | A0A0K9RHD0 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.987 |
SOVF_010980 | SOVF_144680 | A0A0K9RZM1 | A0A0K9QT30 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | SAGA-associated factor 11. | 0.943 |
SOVF_010980 | SOVF_168890 | A0A0K9RZM1 | A0A0K9QKJ1 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Uncharacterized protein. | 0.797 |
SOVF_010980 | SOVF_176640 | A0A0K9RZM1 | A0A0K9QI52 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Uncharacterized protein. | 0.988 |
SOVF_010980 | SOVF_183880 | A0A0K9RZM1 | A0A0K9QHI8 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.985 |
SOVF_010980 | SOVF_184450 | A0A0K9RZM1 | A0A0K9QFN1 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Uncharacterized protein. | 0.542 |
SOVF_010980 | SOVF_213880 | A0A0K9RZM1 | A0A0K9Q8S3 | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | Uncharacterized protein. | 0.988 |
page 1 of 6