STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_008240SE domain-containing protein. (533 aa)    
Predicted Functional Partners:
SOVF_022560
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.995
SOVF_107620
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.983
SOVF_190320
Uncharacterized protein.
  
 
 0.976
SOVF_190300
Uncharacterized protein.
  
 
 0.976
SOVF_190310
Uncharacterized protein.
  
 
 0.976
SOVF_148570
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.924
SOVF_096840
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.924
SOVF_042610
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.924
SOVF_023040
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.906
SOVF_203380
SE domain-containing protein.
  
  
 
0.901
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.