Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_001750 | SOVF_012260 | A0A0K9S2D5 | A0A0K9RZC4 | AB hydrolase-1 domain-containing protein. | Uncharacterized protein. | 0.912 |
SOVF_001750 | SOVF_029550 | A0A0K9S2D5 | A0A0K9RVI2 | AB hydrolase-1 domain-containing protein. | 2-Hacid_dh domain-containing protein. | 0.905 |
SOVF_001750 | SOVF_035200 | A0A0K9S2D5 | A0A0K9RRU6 | AB hydrolase-1 domain-containing protein. | Uncharacterized protein. | 0.649 |
SOVF_001750 | SOVF_052440 | A0A0K9S2D5 | A0A0K9RLP0 | AB hydrolase-1 domain-containing protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.905 |
SOVF_001750 | SOVF_064290 | A0A0K9S2D5 | A0A0K9RJV3 | AB hydrolase-1 domain-containing protein. | Uncharacterized protein. | 0.649 |
SOVF_001750 | SOVF_117540 | A0A0K9S2D5 | A0A0K9R3J4 | AB hydrolase-1 domain-containing protein. | Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. | 0.643 |
SOVF_001750 | SOVF_126730 | A0A0K9S2D5 | A0A0K9QYI9 | AB hydrolase-1 domain-containing protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.905 |
SOVF_001750 | SOVF_146420 | A0A0K9S2D5 | A0A0K9QU47 | AB hydrolase-1 domain-containing protein. | 2-Hacid_dh_C domain-containing protein. | 0.871 |
SOVF_001750 | SOVF_155160 | A0A0K9S2D5 | A0A0K9QPT7 | AB hydrolase-1 domain-containing protein. | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | 0.860 |
SOVF_001750 | SOVF_209850 | A0A0K9S2D5 | A0A0K9QA11 | AB hydrolase-1 domain-containing protein. | Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily. | 0.659 |
SOVF_012260 | SOVF_001750 | A0A0K9RZC4 | A0A0K9S2D5 | Uncharacterized protein. | AB hydrolase-1 domain-containing protein. | 0.912 |
SOVF_012260 | SOVF_029550 | A0A0K9RZC4 | A0A0K9RVI2 | Uncharacterized protein. | 2-Hacid_dh domain-containing protein. | 0.708 |
SOVF_012260 | SOVF_052440 | A0A0K9RZC4 | A0A0K9RLP0 | Uncharacterized protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.708 |
SOVF_012260 | SOVF_126730 | A0A0K9RZC4 | A0A0K9QYI9 | Uncharacterized protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.708 |
SOVF_012260 | SOVF_146420 | A0A0K9RZC4 | A0A0K9QU47 | Uncharacterized protein. | 2-Hacid_dh_C domain-containing protein. | 0.682 |
SOVF_012260 | SOVF_155160 | A0A0K9RZC4 | A0A0K9QPT7 | Uncharacterized protein. | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | 0.882 |
SOVF_012260 | SOVF_209850 | A0A0K9RZC4 | A0A0K9QA11 | Uncharacterized protein. | Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily. | 0.471 |
SOVF_029550 | SOVF_001750 | A0A0K9RVI2 | A0A0K9S2D5 | 2-Hacid_dh domain-containing protein. | AB hydrolase-1 domain-containing protein. | 0.905 |
SOVF_029550 | SOVF_012260 | A0A0K9RVI2 | A0A0K9RZC4 | 2-Hacid_dh domain-containing protein. | Uncharacterized protein. | 0.708 |
SOVF_029550 | SOVF_155160 | A0A0K9RVI2 | A0A0K9QPT7 | 2-Hacid_dh domain-containing protein. | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | 0.727 |
page 1 of 3